Inception. Arguably Star Wars as well. posted by Think_Long at 11:24 AM on March 7, 2012
The Weather Man has a muted but poignant version of this theme, IIRC.
The first season of Six Feet Under plays very well with this theme. posted by Sticherbeast at 11:25 AM on March 7, 2012
Not quite what you're looking for, but Eat Drink Man Woman explores the familial relationships among a father and his three daughters, who have a rather dysfunctional relationship. The movie culminates in the resolution of the dysfunction, with the father realizing that he is finally happy in life and proud of his daughters. posted by LN at 11:25 AM on March 7, 2012 [2 favorites]
The Lion King posted by mkultra at 11:39 AM on March 7, 2012
Hook. Though it takes a bit to realize that's what it is ultimately about. posted by zizzle at 11:41 AM on March 7, 2012 [2 favorites]
Iron Man 2, Big Fish, Rudy, Indiana Jones and the Last Crusade posted by JJtheJetPlane at 11:44 AM on March 7, 2012 [2 favorites]
Oh yeah, John Q; arguably, like Star Wars mention, The Godfather... posted by snap_dragon at 12:13 PM on March 7, 2012
Big Fish.
I saw Big Fish with my dad and brother back when it was making the indie rounds and we both remarked on while the movie was ostensibly about the father, it was really about how the father represented himself to the son. Then we cried for a while. posted by Sphinx at 12:14 PM on March 7, 2012 [2 favorites]
posted by Think_Long at 11:24 AM on March 7, 2012